Conferencia Roger Castells-Graells: "Engineered Protein Cages for Imaging of Small Proteins by Cryo-EM" (18 December, 12h.)

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El día 18 de diciembre tendremos una BIFI-Talk y nos lo ofrece Roger Castells-Graells, investigador de la Universidad de California Los Angeles, en la sala de conferencias del edificio I+D a las 12:00. Roger usa diseño computacional de proteínas e inteligencia artificial para su uso en la determinación estructural de proteínas.
Título de la conferencia:

Engineered Protein Cages for Imaging of Small Proteins by Cryo-EM
Dr. Roger Castells, IRB Barcelona (Barcelona, Spain)
 
Recent technical advances have made cryo-electron microscopy (cryo-EM) an attractive method for atomic structure determination, but problems of low signal-to-noise prevent routine structure determination of proteins smaller than about 50 kDa. We have developed symmetric protein imaging scaffolds to display and solve the structure of small proteins. In earlier work, we demonstrated the design of a novel protein cage scaffold with sufficient rigidity and modularity to reach an imaging resolution of 3.8 Å for a 26 kDa protein. In the present work, we use molecular engineering techniques to further rigidify a new cryo-EM imaging scaffold, enabling 3 Å or better resolution imaging to be achieved, even for very small proteins. We apply this system to the key cancer signaling protein KRAS (19 kDa in size), obtaining four structures of oncogenic mutational variants by cryo-EM. Importantly, a structure for the key G12C mutant bound to an inhibitor drug (AMG510) reveals significant conformational differences compared to prior data in the crystalline state. The findings highlight the promise of cryo-EM scaffolds for advancing the design of drug molecules against small therapeutic protein targets in cancer and other human diseases.

 
References
Castells-Graells, R., Meador, K., Arbing, M. A., Sawaya, M. R., Gee, M., Cascio, D., Gleave, E., Debreczeni, J. É., Breed, J., Leopold, K., Patel, A., Jahagirdar, D., Lyons, B., Subramaniam, S., Phillips, C., & Yeates, T. O. (2023). Cryo-EM structure determination of small therapeutic protein targets at 3 Å-resolution using a rigid imaging scaffold. Proceedings of the National Academy of Sciences of the United States of America, 120(37), e2305494120. https://doi.org/10.1073/pnas.2305494120
 
Meador, K.*, Castells-Graells, R.*, Aguirre, R., Sawaya, M. R., Arbing, M. A., Sherman, T., Senarathne, C., & Yeates, T. O. (2023). A Suite of Designed Protein Cages Using Machine Learning Algorithms and Protein Fragment-Based Protocols. bioRxiv : the preprint server for biology, 2023.10.09.561468. https://doi.org/10.1101/2023.10.09.561468